py-Radiomics

Open-source radiomics library written in python

Pyradiomics is an open-source python package for the extraction of radiomics data from medical images. Image loading and preprocessing (e.g. resampling and cropping) are first done using SimpleITK. Loaded data is then converted into numpy arrays for further calculation using multiple feature classes. Optional filters are also built-in.

Pyradiomics has recently been accepted in Cancer Research.

Open-source

Pyradiomics is developed as an open-source library hosted on Github. We encourage people to contribute code, bugs and feature requests.

GITHUB
Fully documented

All installation instructions, methods and feature classes - together with the relevant mathematical formulae - are fully documented.

DOCUMENTATION
How it works

Import the pyradiomics library into a Jupyter [ipython] notebook and extract selected features either from single images or in batch mode.

Jupyter notebook
Community

Browse the community Google group for frequently asked questions regarding installation, usage and methods - or post your own.

Google Groups
PY-RADIOMICS VIDEO TUTORIAL

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